No. words: 1150; after pruning: 1124


Histogram of relative pair offsets, for read pairs with multiple alignments:
99    12

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 0.1 (1,1:1062)   64  4.82 0.00 1.20  BQ160340Tu01P081F04P081F101F1_049.ab1      298   380 (4)  C BQ160340Tu01P081F04P081F101R1_049.ab1   (0)   766   685 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  28 nodes

 16 str. conn. components

Path
    1    BQ160340Tu01P081F04P081F101F1_049.ab1     1 
  301  C BQ160340Tu01P081F04P081F101R1_049.ab1   763 
  348    BQ160340Tu01P081F04P081F101F1_049.ab1   349 
  352  C BQ160340Tu01P081F04P081F101R1_049.ab1   712 
Contig length: old 1063, new 1063

Contig length: old 1063, new 1063
New start: 0