No. words: 1396; after pruning: 1370


Histogram of relative pair offsets, for read pairs with multiple alignments:
45     2
47     2
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:539)  509  0.00 0.37 0.00  BQ167580Ld02P081B05P081B111F1_037.ab1        1   539 (149)  C BQ167580Ld02P081B05P081B111R1_037.ab1   (167)   541     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1  C BQ167580Ld02P081B05P081B111R1_037.ab1   708 
  556    BQ167580Ld02P081B05P081B111F1_037.ab1   387 
Contig length: old 856, new 857

Contig length: old 857, new 857
New start: 0