No. words: 1046; after pruning: 1020


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     2
47     2
93     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 9.7 (1,1:462)  436  0.00 0.00 0.00  BQ167580Sn31P115B08P081B111F1_017.ab1        1   459 (63)  C BQ167580Sn31P115B08P081B111R1_017.ab1   (61)   463     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BQ167580Sn31P115B08P081B111R1_017.ab1   524 
   69    BQ167580Sn31P115B08P081B111F1_017.ab1     8 
   73  C BQ167580Sn31P115B08P081B111R1_017.ab1   452 
  105    BQ167580Sn31P115B08P081B111F1_017.ab1    44 
  125  C BQ167580Sn31P115B08P081B111R1_017.ab1   400 
  129    BQ167580Sn31P115B08P081B111F1_017.ab1    68 
  133  C BQ167580Sn31P115B08P081B111R1_017.ab1   392 
  145    BQ167580Sn31P115B08P081B111F1_017.ab1    84 
  157  C BQ167580Sn31P115B08P081B111R1_017.ab1   368 
  161    BQ167580Sn31P115B08P081B111F1_017.ab1   100 
  197  C BQ167580Sn31P115B08P081B111R1_017.ab1   328 
  213    BQ167580Sn31P115B08P081B111F1_017.ab1   152 
Contig length: old 583, new 583

Contig length: old 583, new 583
New start: 0