No. words: 1216; after pruning: 1190


Histogram of relative pair offsets, for read pairs with multiple alignments:
45     2
47     2
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.3 (1,1:561)  529  0.00 0.18 0.18  BQ167580Ta13P115F08P081B111F1_062.ab1        1   561 (47)  C BQ167580Ta13P115F08P081B111R1_062.ab1   (46)   562     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  276 nodes

 140 str. conn. components

Path
    1  C BQ167580Ta13P115F08P081B111R1_062.ab1   608 
  461    BQ167580Ta13P115F08P081B111F1_062.ab1   414 
  473  C BQ167580Ta13P115F08P081B111R1_062.ab1   136 
  509    BQ167580Ta13P115F08P081B111F1_062.ab1   462 
Contig length: old 654, new 655

Contig length: old 655, new 655
New start: 0