No. words: 1303; after pruning: 1277


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:476)  444  1.05 0.00 0.21  BQ483083Ld11P081A06P081A121F2_086.ab1        1   477 (153)  C BQ483083Ld11P081A06P081A121R2_086.ab1   (197)   476     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BQ483083Ld11P081A06P081A121R2_086.ab1   673 
  322    BQ483083Ld11P081A06P081A121F2_086.ab1   125 
  326  C BQ483083Ld11P081A06P081A121R2_086.ab1   348 
  334    BQ483083Ld11P081A06P081A121F2_086.ab1   137 
  338  C BQ483083Ld11P081A06P081A121R2_086.ab1   336 
  354    BQ483083Ld11P081A06P081A121F2_086.ab1   157 
  370  C BQ483083Ld11P081A06P081A121R2_086.ab1   304 
  386    BQ483083Ld11P081A06P081A121F2_086.ab1   189 
  394  C BQ483083Ld11P081A06P081A121R2_086.ab1   280 
  398    BQ483083Ld11P081A06P081A121F2_086.ab1   201 
  410  C BQ483083Ld11P081A06P081A121R2_086.ab1   264 
  414    BQ483083Ld11P081A06P081A121F2_086.ab1   217 
  434  C BQ483083Ld11P081A06P081A121R2_086.ab1   240 
  446    BQ483083Ld11P081A06P081A121F2_086.ab1   249 
  466  C BQ483083Ld11P081A06P081A121R2_086.ab1   208 
  470    BQ483083Ld11P081A06P081A121F2_086.ab1   273 
  522  C BQ483083Ld11P081A06P081A121R2_086.ab1   152 
  542    BQ483083Ld11P081A06P081A121F2_086.ab1   345 
  550  C BQ483083Ld11P081A06P081A121R2_086.ab1   124 
  562    BQ483083Ld11P081A06P081A121F2_086.ab1   365 
  574  C BQ483083Ld11P081A06P081A121R2_086.ab1   100 
  582    BQ483083Ld11P081A06P081A121F2_086.ab1   385 
  590  C BQ483083Ld11P081A06P081A121R2_086.ab1    84 
  594    BQ483083Ld11P081A06P081A121F2_086.ab1   397 
  618  C BQ483083Ld11P081A06P081A121R2_086.ab1    56 
  622    BQ483083Ld11P081A06P081A121F2_086.ab1   425 
  630  C BQ483083Ld11P081A06P081A121R2_086.ab1    44 
  634    BQ483083Ld11P081A06P081A121F2_086.ab1   437 
Contig length: old 826, new 827

Contig length: old 827, new 827
New start: 0