No. words: 1039; after pruning: 1013


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 8.2 (1,1:479)  454  0.21 0.00 0.21  BQ483083Td03P137H11P081A121F1_013.ab1       12   480 (47)  C BQ483083Td03P137H11P081A121R1_013.ab1   (44)   468     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BQ483083Td03P137H11P081A121R1_013.ab1   512 
  124    BQ483083Td03P137H11P081A121F1_013.ab1    91 
  132  C BQ483083Td03P137H11P081A121R1_013.ab1   381 
  188    BQ483083Td03P137H11P081A121F1_013.ab1   155 
  208  C BQ483083Td03P137H11P081A121R1_013.ab1   305 
  216    BQ483083Td03P137H11P081A121F1_013.ab1   183 
  264  C BQ483083Td03P137H11P081A121R1_013.ab1   249 
  268    BQ483083Td03P137H11P081A121F1_013.ab1   235 
  324  C BQ483083Td03P137H11P081A121R1_013.ab1   189 
  332    BQ483083Td03P137H11P081A121F1_013.ab1   299 
  360  C BQ483083Td03P137H11P081A121R1_013.ab1   153 
  376    BQ483083Td03P137H11P081A121F1_013.ab1   343 
  384  C BQ483083Td03P137H11P081A121R1_013.ab1   129 
  404    BQ483083Td03P137H11P081A121F1_013.ab1   371 
  428  C BQ483083Td03P137H11P081A121R1_013.ab1    85 
  444    BQ483083Td03P137H11P081A121F1_013.ab1   411 
  468  C BQ483083Td03P137H11P081A121R1_013.ab1    45 
  472    BQ483083Td03P137H11P081A121F1_013.ab1   439 
Contig length: old 559, new 560

Contig length: old 560, new 560
New start: 0