No. words: 1207; after pruning: 1181


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:430)  425  0.00 0.00 0.23  CD452526Ld05P081D06P081D121F1_083.ab1        1   431 (182)  C CD452526Ld05P081D06P081D121R1_083.ab1   (164)   430     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1  C CD452526Ld05P081D06P081D121R1_083.ab1   594 
  236    CD452526Ld05P081D06P081D121F1_083.ab1    72 
  240  C CD452526Ld05P081D06P081D121R1_083.ab1   355 
  500    CD452526Ld05P081D06P081D121F1_083.ab1   336 
Contig length: old 776, new 777

Contig length: old 777, new 777
New start: 0