No. words: 1624; after pruning: 1598 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 5 0.0 13.9 (1,1:890) 699 1.10 0.00 0.00 (UMN171F)_H01_BE403509Tu02P166D01P166D041F1_001.ab1 9 736 (0) C (UMN171R)_H01_BE403509Tu02P166D01P166D041R1_001.ab1 (5) 883 156 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 5 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 354 nodes 179 str. conn. components Path 1 (UMN171F)_H01_BE403509Tu02P166D01P166D041F1_001.ab1 1 12 C (UMN171R)_H01_BE403509Tu02P166D01P166D041R1_001.ab1 880 16 (UMN171F)_H01_BE403509Tu02P166D01P166D041F1_001.ab1 16 36 C (UMN171R)_H01_BE403509Tu02P166D01P166D041R1_001.ab1 856 55 (UMN171F)_H01_BE403509Tu02P166D01P166D041F1_001.ab1 55 79 C (UMN171R)_H01_BE403509Tu02P166D01P166D041R1_001.ab1 813 96 (UMN171F)_H01_BE403509Tu02P166D01P166D041F1_001.ab1 96 156 C (UMN171R)_H01_BE403509Tu02P166D01P166D041R1_001.ab1 736 169 (UMN171F)_H01_BE403509Tu02P166D01P166D041F1_001.ab1 169 305 C (UMN171R)_H01_BE403509Tu02P166D01P166D041R1_001.ab1 587 577 (UMN171F)_H01_BE403509Tu02P166D01P166D041F1_001.ab1 577 581 C (UMN171R)_H01_BE403509Tu02P166D01P166D041R1_001.ab1 311 Contig length: old 891, new 891 Contig length: old 891, new 891 New start: 0