No. words: 1086; after pruning: 1060


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:490)  488  0.00 0.00 0.00  KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1        1   491 (57)  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   (47)   491     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   538 
   79    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1    32 
   87  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   452 
   91    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1    44 
   99  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   440 
  103    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1    56 
  111  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   428 
  131    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1    84 
  139  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   400 
  143    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1    96 
  151  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   388 
  155    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   108 
  171  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   368 
  175    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   128 
  179  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   360 
  183    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   136 
  191  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   348 
  199    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   152 
  247  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   292 
  251    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   204 
  279  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   260 
  303    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   256 
  311  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   228 
  379    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   332 
  391  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   148 
  407    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   360 
  419  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   120 
  423    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   376 
  431  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1   108 
  435    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   388 
  443  C KSU051_A01_BE404401Tu02P009A01A071R1_015.ab1    96 
  451    KSU050_A01_BE404401Tu02P009A01A071F1_015.ab1   404 
Contig length: old 595, new 595

Contig length: old 595, new 595
New start: 0