No. words: 910; after pruning: 884


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.7 (1,1:314)  305  0.32 0.00 0.32  KSU014_G01_BE404717Ld07P006A01A071F1_003.ab1        1   315 (127)  C KSU015_G01_BE404717Ld07P006A01A071R1_003.ab1   (154)   314     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1  C KSU015_G01_BE404717Ld07P006A01A071R1_003.ab1   468 
  306    KSU014_G01_BE404717Ld07P006A01A071F1_003.ab1   152 
  346  C KSU015_G01_BE404717Ld07P006A01A071R1_003.ab1   123 
  358    KSU014_G01_BE404717Ld07P006A01A071F1_003.ab1   204 
  390  C KSU015_G01_BE404717Ld07P006A01A071R1_003.ab1    79 
  394    KSU014_G01_BE404717Ld07P006A01A071F1_003.ab1   240 
Contig length: old 595, new 596

Contig length: old 596, new 596
New start: 0