No. words: 1057; after pruning: 1031


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:373)  353  0.00 0.27 0.00  KSU047_B11_BE404977Ld18P006B01B071F1_093.ab1        2   374 (164)  C KSU048_B11_BE404977Ld18P006B01B071R1_093.ab1   (145)   374     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1  C KSU048_B11_BE404977Ld18P006B01B071R1_093.ab1   519 
  455    KSU047_B11_BE404977Ld18P006B01B071F1_093.ab1   310 
Contig length: old 683, new 683

Contig length: old 683, new 683
New start: 0