No. words: 1047; after pruning: 1021 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 8.0 (1,1:373) 345 0.00 0.53 0.27 KSU047_E12_BE404977Ld29P006B01B071F1_088.ab1 1 374 (161) C KSU048_E12_BE404977Ld29P006B01B071R1_088.ab1 (137) 375 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 182 nodes 93 str. conn. components Path 1 C KSU048_E12_BE404977Ld29P006B01B071R1_088.ab1 512 374 KSU047_E12_BE404977Ld29P006B01B071F1_088.ab1 235 378 C KSU048_E12_BE404977Ld29P006B01B071R1_088.ab1 135 422 KSU047_E12_BE404977Ld29P006B01B071F1_088.ab1 283 430 C KSU048_E12_BE404977Ld29P006B01B071R1_088.ab1 83 434 KSU047_E12_BE404977Ld29P006B01B071F1_088.ab1 295 438 C KSU048_E12_BE404977Ld29P006B01B071R1_088.ab1 75 446 KSU047_E12_BE404977Ld29P006B01B071F1_088.ab1 307 450 C KSU048_E12_BE404977Ld29P006B01B071R1_088.ab1 63 466 KSU047_E12_BE404977Ld29P006B01B071F1_088.ab1 327 470 C KSU048_E12_BE404977Ld29P006B01B071R1_088.ab1 43 474 KSU047_E12_BE404977Ld29P006B01B071F1_088.ab1 335 478 C KSU048_E12_BE404977Ld29P006B01B071R1_088.ab1 35 486 KSU047_E12_BE404977Ld29P006B01B071F1_088.ab1 347 Contig length: old 673, new 674 Contig length: old 674, new 674 New start: 0