No. words: 1294; after pruning: 1268


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:486)  486  0.00 0.00 0.00  KSU012_C08_BE425301Ld11P006D01D071F1_060.ab1        1   487 (151)  C KSU013_C08_BE425301Ld11P006D01D071R1_060.ab1   (169)   487     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C KSU013_C08_BE425301Ld11P006D01D071R1_060.ab1   656 
  513    KSU012_C08_BE425301Ld11P006D01D071F1_060.ab1   344 
Contig length: old 807, new 807

Contig length: old 807, new 807
New start: 0