No. words: 1300; after pruning: 1274


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:491)  486  0.00 0.20 0.00  KSU012_F08_BE425301Ld14P006D01D071F1_054.ab1        1   492 (146)  C KSU013_F08_BE425301Ld14P006D01D071R1_054.ab1   (169)   493     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C KSU013_F08_BE425301Ld14P006D01D071R1_054.ab1   662 
  515    KSU012_F08_BE425301Ld14P006D01D071F1_054.ab1   345 
Contig length: old 808, new 808

Contig length: old 808, new 808
New start: 0