No. words: 1093; after pruning: 1067


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 11.1 (1,1:528)  520  0.00 0.00 0.00  KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1        1   522 (25)  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   (17)   529     8 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   546 
   21    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1     4 
   25  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   522 
   89    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1    72 
  101  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   446 
  109    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1    92 
  113  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   434 
  129    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1   112 
  137  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   410 
  141    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1   124 
  145  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   402 
  249    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1   232 
  305  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   242 
  349    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1   332 
  385  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   162 
  397    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1   380 
  425  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1   122 
  441    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1   424 
  457  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1    90 
  461    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1   444 
  473  C KSU007_C10_BE426317Tu01P009F01F071R1_070.ab1    74 
  481    KSU006_C10_BE426317Tu01P009F01F071F1_070.ab1   464 
Contig length: old 564, new 564

Contig length: old 564, new 564
New start: 0