No. words: 1172; after pruning: 1146


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:762)  373  1.47 0.00 0.24  KSU050_G07_BE438226As02P009G01G071F1_051.ab1      119   527 (0)  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   (0)   645   238 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  188 nodes

 96 str. conn. components

Path
    1    KSU050_G07_BE438226As02P009G01G071F1_051.ab1     1 
  130  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   634 
  139    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   139 
  147  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   617 
  151    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   151 
  204  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   560 
  212    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   212 
  220  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   544 
  228    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   228 
  244  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   520 
  252    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   252 
  256  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   508 
  284    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   284 
  300  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   464 
  304    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   304 
  340  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   424 
  374    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   374 
  382  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   382 
  411    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   411 
  415  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   349 
  419    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   419 
  423  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   341 
  476    KSU050_G07_BE438226As02P009G01G071F1_051.ab1   476 
  480  C KSU051_G07_BE438226As02P009G01G071R1_051.ab1   284 
Contig length: old 763, new 763

Contig length: old 763, new 763
New start: 0