No. words: 1733; after pruning: 1693


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 17.1 (1,1:812)  773  0.12 0.12 0.12  KSU014_H03_BE438268Ld08P006E01E071F1_017.ab1       11   811 (118)  C KSU015_H03_BE438268Ld08P006E01E071R1_017.ab1   (0)   804     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  394 nodes

 199 str. conn. components

Path
    1    KSU014_H03_BE438268Ld08P006E01E071F1_017.ab1     1 
   30  C KSU015_H03_BE438268Ld08P006E01E071R1_017.ab1   785 
   43    KSU014_H03_BE438268Ld08P006E01E071F1_017.ab1    42 
  615  C KSU015_H03_BE438268Ld08P006E01E071R1_017.ab1   200 
  793    KSU014_H03_BE438268Ld08P006E01E071F1_017.ab1   792 
Contig length: old 929, new 930

Contig length: old 930, new 930
New start: 0