No. words: 1598; after pruning: 1572


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.4 (1,1:815)  768  0.00 0.00 0.00  KSU014_F04_BE438268Ld14P006E01E071F1_022.ab1       23   804 (0)  C KSU015_F04_BE438268Ld14P006E01E071R1_022.ab1   (0)   794    13 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1    KSU014_F04_BE438268Ld14P006E01E071F1_022.ab1     1 
  502  C KSU015_F04_BE438268Ld14P006E01E071R1_022.ab1   315 
Contig length: old 816, new 816

Contig length: old 816, new 816
New start: 0