No. words: 1473; after pruning: 1433


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:805)  645  0.30 0.00 0.00  KSU014_G04_BE438268Ld15P006E01E071F1_020.ab1      149   806 (9)  C KSU015_G04_BE438268Ld15P006E01E071R1_020.ab1   (0)   658     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  324 nodes

 164 str. conn. components

Path
    1    KSU014_G04_BE438268Ld15P006E01E071F1_020.ab1     1 
  493  C KSU015_G04_BE438268Ld15P006E01E071R1_020.ab1   314 
  788    KSU014_G04_BE438268Ld15P006E01E071F1_020.ab1   788 
  792  C KSU015_G04_BE438268Ld15P006E01E071R1_020.ab1    15 
  796    KSU014_G04_BE438268Ld15P006E01E071F1_020.ab1   796 
Contig length: old 815, new 815

Contig length: old 815, new 815
New start: 0