No. words: 571; after pruning: 545


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    5   -2.9 -2.9 (1,1:143)   77  9.35 0.00 0.00  KSU014_B06_BE442631Ld10P006F01F071F1_046.ab1       33   139 (320)  C KSU015_B06_BE442631Ld10P006F01F071R1_046.ab1   (0)   112     6 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.9       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  32 nodes

 18 str. conn. components

Path
    1    KSU014_B06_BE442631Ld10P006F01F071F1_046.ab1     1 
Contig length: old 459, new 459

Contig length: old 459, new 459
New start: 0