No. words: 890; after pruning: 864


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:419)  403  0.00 0.00 0.00  KSU006_F05_BE442995As01P009H01H071F1_043.ab1        1   420 (32)  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   (18)   420     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   438 
   88    KSU006_F05_BE442995As01P009H01H071F1_043.ab1    70 
   96  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   343 
  136    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   118 
  140  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   299 
  148    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   130 
  160  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   279 
  176    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   158 
  180  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   259 
  208    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   190 
  224  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   215 
  252    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   234 
  264  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   175 
  268    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   250 
  280  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   159 
  292    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   274 
  300  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   139 
  304    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   286 
  316  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   123 
  320    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   302 
  332  C KSU007_F05_BE442995As01P009H01H071R1_043.ab1   107 
  340    KSU006_F05_BE442995As01P009H01H071F1_043.ab1   322 
Contig length: old 470, new 470

Contig length: old 470, new 470
New start: 0