No. words: 1713; after pruning: 1661


Histogram of relative pair offsets, for read pairs with multiple alignments:
99    14

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:407)  379  0.00 0.00 0.00  KSU008_G11_BE442995As02P009H01H071F1_084.ab1       14   408 (34)  C KSU009_G11_BE442995As02P009H01H071R1_084.ab1   (0)   395     1 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (2,1:21)  402  0.00 0.00 0.00  KSU008_G11_BE442995As02P009H01H071F1_084.ab1       22   442 (0)    KSU050_H07_BE442995As02P009H01H071F2_049.ab1        1   421 (15) *
Merge:(0)    1    0.0 7.4 (3,1:410)  374  0.00 0.00 0.00  KSU009_G11_BE442995As02P009H01H071R1_084.ab1        5   395 (0)    KSU051_H07_BE442995As02P009H01H071F2_049.ab1        8   398 (42) *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       1        0
 1       1        0

Offset
  0       5 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  1180 nodes

 406 str. conn. components

Path
    1  C KSU051_H07_BE442995As02P009H01H071F2_049.ab1   440 
  258    KSU050_H07_BE442995As02P009H01H071F2_049.ab1   208 
Contig length: old 486, new 486

Contig length: old 486, new 486
New start: 0