No. words: 875; after pruning: 835


Histogram of relative pair offsets, for read pairs with multiple alignments:
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (1,1:399)  382  0.00 0.25 0.00  KSU008_B07_BE442995At01P009H01H071F1_057.ab1        1   400 (46)  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1   (28)   401     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1   429 
   32    KSU008_B07_BE442995At01P009H01H071F1_057.ab1     4 
   45  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1   384 
   57    KSU008_B07_BE442995At01P009H01H071F1_057.ab1    29 
   65  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1   364 
   69    KSU008_B07_BE442995At01P009H01H071F1_057.ab1    41 
   73  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1   356 
   89    KSU008_B07_BE442995At01P009H01H071F1_057.ab1    61 
   97  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1   332 
  157    KSU008_B07_BE442995At01P009H01H071F1_057.ab1   129 
  165  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1   264 
  193    KSU008_B07_BE442995At01P009H01H071F1_057.ab1   165 
  209  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1   220 
  257    KSU008_B07_BE442995At01P009H01H071F1_057.ab1   229 
  313  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1   116 
  321    KSU008_B07_BE442995At01P009H01H071F1_057.ab1   293 
  333  C KSU009_B07_BE442995At01P009H01H071R1_057.ab1    96 
  337    KSU008_B07_BE442995At01P009H01H071F1_057.ab1   309 
Contig length: old 475, new 474

Contig length: old 474, new 474
New start: 0