No. words: 924; after pruning: 898


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.0 (1,1:387)  349  0.00 0.00 0.00  KSU022_C02_BE442995Ld11P009H01H071F1_012.ab1        1   360 (0)  C KSU023_C02_BE442995Ld11P009H01H071R1_012.ab1   (176)   388    29 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  182 nodes

 93 str. conn. components

Path
    1  C KSU023_C02_BE442995Ld11P009H01H071R1_012.ab1   564 
Contig length: old 564, new 564

Contig length: old 564, new 564
New start: 0