No. words: 1208; after pruning: 1182


Histogram of relative pair offsets, for read pairs with multiple alignments:
63     2
65     2
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.6 (1,1:580)  559  0.00 0.00 0.34  KSU008_E07_BE443291At01P009C02C081F1_051.ab1        1   582 (29)  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   (17)   580     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   597 
   37    KSU008_E07_BE443291At01P009C02C081F1_051.ab1    20 
   45  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   553 
   81    KSU008_E07_BE443291At01P009C02C081F1_051.ab1    64 
  105  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   493 
  113    KSU008_E07_BE443291At01P009C02C081F1_051.ab1    96 
  121  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   477 
  125    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   108 
  129  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   469 
  133    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   116 
  137  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   461 
  145    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   128 
  169  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   429 
  177    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   160 
  181  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   417 
  193    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   176 
  201  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   397 
  205    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   188 
  253  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   345 
  281    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   264 
  289  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   309 
  305    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   288 
  333  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   265 
  345    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   328 
  385  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   213 
  401    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   384 
  441  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   157 
  449    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   432 
  457  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   141 
  465    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   448 
  485  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1   113 
  497    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   480 
  505  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1    93 
  509    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   492 
  517  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1    81 
  525    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   508 
  537  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1    61 
  545    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   528 
  566  C KSU009_E07_BE443291At01P009C02C081R1_051.ab1    33 
  586    KSU008_E07_BE443291At01P009C02C081F1_051.ab1   569 
Contig length: old 627, new 628

Contig length: old 628, new 628
New start: 0