No. words: 1484; after pruning: 1444


Histogram of relative pair offsets, for read pairs with multiple alignments:
44     2
46     2
90     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:582)  561  0.00 0.00 0.34  KSU043_G07_BE443500Ld07P009D02D081F2_051.ab1        1   584 (167)  C KSU044_G07_BE443500Ld07P009D02D081R2_051.ab1   (151)   582     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C KSU044_G07_BE443500Ld07P009D02D081R2_051.ab1   733 
  159    KSU043_G07_BE443500Ld07P009D02D081F2_051.ab1     8 
  191  C KSU044_G07_BE443500Ld07P009D02D081R2_051.ab1   543 
  195    KSU043_G07_BE443500Ld07P009D02D081F2_051.ab1    44 
  215  C KSU044_G07_BE443500Ld07P009D02D081R2_051.ab1   519 
  255    KSU043_G07_BE443500Ld07P009D02D081F2_051.ab1   104 
  339  C KSU044_G07_BE443500Ld07P009D02D081R2_051.ab1   395 
  395    KSU043_G07_BE443500Ld07P009D02D081F2_051.ab1   244 
  439  C KSU044_G07_BE443500Ld07P009D02D081R2_051.ab1   295 
  483    KSU043_G07_BE443500Ld07P009D02D081F2_051.ab1   332 
  567  C KSU044_G07_BE443500Ld07P009D02D081R2_051.ab1   167 
  575    KSU043_G07_BE443500Ld07P009D02D081F2_051.ab1   424 
  647  C KSU044_G07_BE443500Ld07P009D02D081R2_051.ab1    87 
  663    KSU043_G07_BE443500Ld07P009D02D081F2_051.ab1   512 
Contig length: old 901, new 902

Contig length: old 902, new 902
New start: 0 
S Change at: 777; seg lengths: entry 1, contig 1