No. words: 1118; after pruning: 1092


Histogram of relative pair offsets, for read pairs with multiple alignments:
44     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:620)  462  0.41 0.41 0.00  KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1      132   620 (7)  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   (0)   491     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1     1 
  217  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   406 
  221    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   221 
  289  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   334 
  321    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   321 
  325  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   298 
  361    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   361 
  365  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   258 
  369    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   369 
  377  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   246 
  405    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   405 
  409  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   214 
  453    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   453 
  457  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   166 
  461    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   461 
  469  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   154 
  473    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   473 
  477  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   146 
  509    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   509 
  513  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1   110 
  521    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   521 
  525  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1    98 
  529    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   529 
  537  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1    86 
  545    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   545 
  553  C KSU007_A11_BE443500Tu01P009D02D081R1_081.ab1    70 
  557    KSU006_A11_BE443500Tu01P009D02D081F1_081.ab1   557 
Contig length: old 627, new 627

Contig length: old 627, new 627
New start: 0