No. words: 418; after pruning: 392


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 0.5 (1,1:386)   28  0.00 0.00 0.00  KSU022_D07_BE443537Ld04P009E02E081F1_057.ab1      182   210 (0)  C KSU023_D07_BE443537Ld04P009E02E081R1_057.ab1   (2)   206   178 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  16 nodes

 10 str. conn. components

Path
    1    KSU022_D07_BE443537Ld04P009E02E081F1_057.ab1     1 
  185  C KSU023_D07_BE443537Ld04P009E02E081R1_057.ab1   203 
Contig length: old 387, new 387

Contig length: old 387, new 387
New start: 0