No. words: 745; after pruning: 719


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:399)  309  0.93 0.00 0.00  KSU006_B11_BE443537Tu01P009E02E081F1_089.ab1       79   400 (23)  C KSU007_B11_BE443537Tu01P009E02E081R1_089.ab1   (0)   322     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  154 nodes

 79 str. conn. components

Path
    1    KSU006_B11_BE443537Tu01P009E02E081F1_089.ab1     1 
  212  C KSU007_B11_BE443537Tu01P009E02E081R1_089.ab1   189 
  220    KSU006_B11_BE443537Tu01P009E02E081F1_089.ab1   220 
  256  C KSU007_B11_BE443537Tu01P009E02E081R1_089.ab1   145 
  260    KSU006_B11_BE443537Tu01P009E02E081F1_089.ab1   260 
  264  C KSU007_B11_BE443537Tu01P009E02E081R1_089.ab1   137 
  268    KSU006_B11_BE443537Tu01P009E02E081F1_089.ab1   268 
  272  C KSU007_B11_BE443537Tu01P009E02E081R1_089.ab1   129 
  280    KSU006_B11_BE443537Tu01P009E02E081F1_089.ab1   280 
  304  C KSU007_B11_BE443537Tu01P009E02E081R1_089.ab1    97 
  308    KSU006_B11_BE443537Tu01P009E02E081F1_089.ab1   308 
  336  C KSU007_B11_BE443537Tu01P009E02E081R1_089.ab1    65 
  340    KSU006_B11_BE443537Tu01P009E02E081F1_089.ab1   340 
Contig length: old 423, new 423

Contig length: old 423, new 423
New start: 0