No. words: 1872; after pruning: 1846 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 18.3 (1,1:1049) 812 0.00 0.00 0.00 KSU050_G02_BE444561Tu02P009G02G081F1_004.ab1 104 925 (0) C KSU051_G02_BE444561Tu02P009G02G081R1_004.ab1 (0) 947 126 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 412 nodes 208 str. conn. components Path 1 KSU050_G02_BE444561Tu02P009G02G081F1_004.ab1 1 215 C KSU051_G02_BE444561Tu02P009G02G081R1_004.ab1 836 219 KSU050_G02_BE444561Tu02P009G02G081F1_004.ab1 219 239 C KSU051_G02_BE444561Tu02P009G02G081R1_004.ab1 812 243 KSU050_G02_BE444561Tu02P009G02G081F1_004.ab1 243 251 C KSU051_G02_BE444561Tu02P009G02G081R1_004.ab1 800 255 KSU050_G02_BE444561Tu02P009G02G081F1_004.ab1 255 287 C KSU051_G02_BE444561Tu02P009G02G081R1_004.ab1 764 303 KSU050_G02_BE444561Tu02P009G02G081F1_004.ab1 303 311 C KSU051_G02_BE444561Tu02P009G02G081R1_004.ab1 740 315 KSU050_G02_BE444561Tu02P009G02G081F1_004.ab1 315 323 C KSU051_G02_BE444561Tu02P009G02G081R1_004.ab1 728 327 KSU050_G02_BE444561Tu02P009G02G081F1_004.ab1 327 331 C KSU051_G02_BE444561Tu02P009G02G081R1_004.ab1 720 Contig length: old 1050, new 1050 Contig length: old 1050, new 1050 New start: 0