No. words: 693; after pruning: 667


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.8 (1,1:313)  220  0.45 0.00 0.00  KSU039_E04_BE446061Ld13P009A03A091F2_024.ab1        1   223 (0)  C KSU039_E10_BE446061Ld13P009A03A091R2_072.ab1   (156)   314    92 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  110 nodes

 57 str. conn. components

Path
    1  C KSU039_E10_BE446061Ld13P009A03A091R2_072.ab1   470 
Contig length: old 470, new 470

Contig length: old 470, new 470
New start: 0