No. words: 1845; after pruning: 1819


Histogram of relative pair offsets, for read pairs with multiple alignments:
 4     4
64     2
66     2
68     2
70     2
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.7 (1,1:958)  854  0.00 0.23 0.00  KSU047_D03_BE496999Ld04P006H02H081F1_025.ab1       47   931 (0)  C KSU048_D03_BE496999Ld04P006H02H081R1_025.ab1   (0)   914    28 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  438 nodes

 221 str. conn. components

Path
    1    KSU047_D03_BE496999Ld04P006H02H081F1_025.ab1     1 
  527  C KSU048_D03_BE496999Ld04P006H02H081R1_025.ab1   434 
Contig length: old 959, new 960

Contig length: old 960, new 960
New start: 0