No. words: 1816; after pruning: 1790


Histogram of relative pair offsets, for read pairs with multiple alignments:
 3     2
 4     2
11     2
12     2
15     4
54     4
65     2
66     2
69     4
99    18

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.9 (1,1:1010)  777  0.00 0.00 0.00  KSU047_G03_BE496999Ld07P006H02H081F1_019.ab1      135   939 (0)  C KSU048_G03_BE496999Ld07P006H02H081R1_019.ab1   (0)   877    73 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  404 nodes

 204 str. conn. components

Path
    1    KSU047_G03_BE496999Ld07P006H02H081F1_019.ab1     1 
  598  C KSU048_G03_BE496999Ld07P006H02H081R1_019.ab1   414 
Contig length: old 1011, new 1011

Contig length: old 1011, new 1011
New start: 0