No. words: 1817; after pruning: 1791


Histogram of relative pair offsets, for read pairs with multiple alignments:
 3     2
 4     2
65     2
66     2
69     4
99     8

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.8 (1,1:954)  837  0.12 0.00 0.00  KSU047_H03_BE496999Ld08P006H02H081F1_017.ab1       80   941 (0)  C KSU048_H03_BE496999Ld08P006H02H081R1_017.ab1   (0)   876    15 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  428 nodes

 216 str. conn. components

Path
    1    KSU047_H03_BE496999Ld08P006H02H081F1_017.ab1     1 
  683  C KSU048_H03_BE496999Ld08P006H02H081R1_017.ab1   273 
Contig length: old 955, new 955

Contig length: old 955, new 955
New start: 0