No. words: 614; after pruning: 588


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.3 (1,1:346)  238  0.00 0.00 0.00  KSU006_F01_BE497134Tu02P006B03B091F1_011.ab1      107   347 (26)  C KSU007_F01_BE497134Tu02P006B03B091R1_011.ab1   (0)   241     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  122 nodes

 63 str. conn. components

Path
    1    KSU006_F01_BE497134Tu02P006B03B091F1_011.ab1     1 
  134  C KSU007_F01_BE497134Tu02P006B03B091R1_011.ab1   214 
  138    KSU006_F01_BE497134Tu02P006B03B091F1_011.ab1   138 
  142  C KSU007_F01_BE497134Tu02P006B03B091R1_011.ab1   206 
  146    KSU006_F01_BE497134Tu02P006B03B091F1_011.ab1   146 
  170  C KSU007_F01_BE497134Tu02P006B03B091R1_011.ab1   178 
  178    KSU006_F01_BE497134Tu02P006B03B091F1_011.ab1   178 
  238  C KSU007_F01_BE497134Tu02P006B03B091R1_011.ab1   110 
  242    KSU006_F01_BE497134Tu02P006B03B091F1_011.ab1   242 
  250  C KSU007_F01_BE497134Tu02P006B03B091R1_011.ab1    98 
  254    KSU006_F01_BE497134Tu02P006B03B091F1_011.ab1   254 
  282  C KSU007_F01_BE497134Tu02P006B03B091R1_011.ab1    66 
  286    KSU006_F01_BE497134Tu02P006B03B091F1_011.ab1   286 
Contig length: old 373, new 373

Contig length: old 373, new 373
New start: 0