No. words: 1076; after pruning: 1050


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 7.0 (1,1:375)  363  0.00 0.00 0.27  KSU045_F04_BE497184Ld05P006D03D091F2_022.ab1        1   375 (174)  C KSU046_F04_BE497184Ld05P006D03D091R2_022.ab1   (152)   375     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C KSU046_F04_BE497184Ld05P006D03D091R2_022.ab1   527 
  396    KSU045_F04_BE497184Ld05P006D03D091F2_022.ab1   244 
Contig length: old 700, new 701

Contig length: old 701, new 701
New start: 0