No. words: 1075; after pruning: 1049


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.7 (1,1:374)  364  0.00 0.00 0.27  KSU045_A05_BE497184Ld11P006D03D091F2_047.ab1        1   375 (147)  C KSU046_A05_BE497184Ld11P006D03D091R2_047.ab1   (179)   374     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  186 nodes

 95 str. conn. components

Path
    1  C KSU046_A05_BE497184Ld11P006D03D091R2_047.ab1   553 
  371    KSU045_A05_BE497184Ld11P006D03D091F2_047.ab1   192 
Contig length: old 700, new 701

Contig length: old 701, new 701
New start: 0