No. words: 1660; after pruning: 1634 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 13.7 (1,1:1011) 615 0.62 0.00 0.00 KSU008_C08_BE497224At01P009C03C091F1_054.ab1 190 837 (0) C KSU009_C08_BE497224At01P009C03C091R1_054.ab1 (0) 823 176 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 316 nodes 160 str. conn. components Path 1 KSU008_C08_BE497224At01P009C03C091F1_054.ab1 1 414 C KSU009_C08_BE497224At01P009C03C091R1_054.ab1 599 418 KSU008_C08_BE497224At01P009C03C091F1_054.ab1 418 450 C KSU009_C08_BE497224At01P009C03C091R1_054.ab1 563 462 KSU008_C08_BE497224At01P009C03C091F1_054.ab1 462 506 C KSU009_C08_BE497224At01P009C03C091R1_054.ab1 507 514 KSU008_C08_BE497224At01P009C03C091F1_054.ab1 514 534 C KSU009_C08_BE497224At01P009C03C091R1_054.ab1 479 538 KSU008_C08_BE497224At01P009C03C091F1_054.ab1 538 558 C KSU009_C08_BE497224At01P009C03C091R1_054.ab1 455 566 KSU008_C08_BE497224At01P009C03C091F1_054.ab1 566 574 C KSU009_C08_BE497224At01P009C03C091R1_054.ab1 439 578 KSU008_C08_BE497224At01P009C03C091F1_054.ab1 578 582 C KSU009_C08_BE497224At01P009C03C091R1_054.ab1 431 Contig length: old 1012, new 1012 Contig length: old 1012, new 1012 New start: 0