No. words: 1615; after pruning: 1575 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 13.4 (1,1:1002) 586 0.33 0.00 0.00 KSU008_D04_BE497224At02P009C03C091F1_030.ab1 189 800 (0) C KSU009_D04_BE497224At02P009C03C091R1_030.ab1 (0) 815 204 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 302 nodes 153 str. conn. components Path 1 KSU008_D04_BE497224At02P009C03C091F1_030.ab1 1 408 C KSU009_D04_BE497224At02P009C03C091R1_030.ab1 596 417 KSU008_D04_BE497224At02P009C03C091F1_030.ab1 417 441 C KSU009_D04_BE497224At02P009C03C091R1_030.ab1 563 445 KSU008_D04_BE497224At02P009C03C091F1_030.ab1 445 457 C KSU009_D04_BE497224At02P009C03C091R1_030.ab1 547 469 KSU008_D04_BE497224At02P009C03C091F1_030.ab1 469 477 C KSU009_D04_BE497224At02P009C03C091R1_030.ab1 527 501 KSU008_D04_BE497224At02P009C03C091F1_030.ab1 501 505 C KSU009_D04_BE497224At02P009C03C091R1_030.ab1 499 521 KSU008_D04_BE497224At02P009C03C091F1_030.ab1 521 533 C KSU009_D04_BE497224At02P009C03C091R1_030.ab1 471 541 KSU008_D04_BE497224At02P009C03C091F1_030.ab1 541 549 C KSU009_D04_BE497224At02P009C03C091R1_030.ab1 455 Contig length: old 1003, new 1003 Contig length: old 1003, new 1003 New start: 0