No. words: 1486; after pruning: 1446


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:954)  497  0.75 0.00 0.19  KSU012_D11_BE497402Ld04P006E03E091F1_089.ab1      224   754 (0)  C KSU013_D11_BE497402Ld04P006E03E091R1_089.ab1   (0)   732   203 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1    KSU012_D11_BE497402Ld04P006E03E091F1_089.ab1     1 
  488  C KSU013_D11_BE497402Ld04P006E03E091R1_089.ab1   468 
Contig length: old 955, new 955

Contig length: old 955, new 955
New start: 0