No. words: 1434; after pruning: 1408


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:967)  451  0.00 0.00 0.00  KSU012_F11_BE497402Ld06P006E03E091F1_085.ab1      225   690 (0)  C KSU013_F11_BE497402Ld06P006E03E091R1_085.ab1   (0)   744   279 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1    KSU012_F11_BE497402Ld06P006E03E091F1_085.ab1     1 
  524  C KSU013_F11_BE497402Ld06P006E03E091R1_085.ab1   445 
Contig length: old 968, new 968

Contig length: old 968, new 968
New start: 0