No. words: 970; after pruning: 944


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.2 (1,1:324)  319  0.00 0.00 0.00  KSU047_F07_BE497618Ld22P006G03G091F1_053.ab1        1   325 (181)  C KSU048_F07_BE497618Ld22P006G03G091R1_053.ab1   (139)   325     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  164 nodes

 84 str. conn. components

Path
    1  C KSU048_F07_BE497618Ld22P006G03G091R1_053.ab1   464 
  203    KSU047_F07_BE497618Ld22P006G03G091F1_053.ab1    64 
  207  C KSU048_F07_BE497618Ld22P006G03G091R1_053.ab1   258 
  223    KSU047_F07_BE497618Ld22P006G03G091F1_053.ab1    84 
  231  C KSU048_F07_BE497618Ld22P006G03G091R1_053.ab1   234 
  315    KSU047_F07_BE497618Ld22P006G03G091F1_053.ab1   176 
Contig length: old 645, new 645

Contig length: old 645, new 645
New start: 0