No. words: 1447; after pruning: 1421


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:714)  669  0.42 0.00 0.28  KSU004_F09_BE499948As02P006E04E101F1_075.ab1        1   714 (0)  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   (19)   714     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  342 nodes

 173 str. conn. components

Path
    1  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   733 
   23    KSU004_F09_BE499948As02P006E04E101F1_075.ab1     4 
   39  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   695 
   50    KSU004_F09_BE499948As02P006E04E101F1_075.ab1    31 
   82  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   652 
   90    KSU004_F09_BE499948As02P006E04E101F1_075.ab1    71 
   94  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   640 
  102    KSU004_F09_BE499948As02P006E04E101F1_075.ab1    83 
  122  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   612 
  134    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   115 
  150  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   584 
  154    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   135 
  162  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   572 
  182    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   163 
  186  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   548 
  194    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   175 
  214  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   520 
  218    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   199 
  322  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   412 
  338    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   319 
  342  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   392 
  354    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   335 
  362  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   372 
  366    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   347 
  374  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   360 
  398    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   379 
  402  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   332 
  419    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   400 
  431  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   303 
  455    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   436 
  459  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   275 
  575    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   556 
  583  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   151 
  607    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   588 
  615  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1   119 
  694    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   675 
  698  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1    36 
  706    KSU004_F09_BE499948As02P006E04E101F1_075.ab1   687 
  729  C KSU005_F09_BE499948As02P006E04E101R1_075.ab1     7 
Contig length: old 733, new 735

Contig length: old 735, new 735
New start: 0