No. words: 1345; after pruning: 1319


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:811)  507  0.56 0.00 0.00  KSU018_G07_BE500634Ld07P006F04F101F1_051.ab1      100   632 (0)  C KSU019_G07_BE500634Ld07P006F04F101R1_051.ab1   (0)   713   181 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1    KSU018_G07_BE500634Ld07P006F04F101F1_051.ab1     1 
  522  C KSU019_G07_BE500634Ld07P006F04F101R1_051.ab1   291 
Contig length: old 812, new 812

Contig length: old 812, new 812
New start: 0