No. words: 1674; after pruning: 1648


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 15.1 (1,1:829)  765  0.00 0.13 0.25  KSU018_B08_BE500634Ld10P006F04F101F1_062.ab1       34   829 (47)  C KSU019_B08_BE500634Ld10P006F04F101R1_062.ab1   (0)   798     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1    KSU018_B08_BE500634Ld10P006F04F101F1_062.ab1     1 
  531  C KSU019_B08_BE500634Ld10P006F04F101R1_062.ab1   300 
  811    KSU018_B08_BE500634Ld10P006F04F101F1_062.ab1   811 
Contig length: old 876, new 876

Contig length: old 876, new 876
New start: 0