No. words: 1765; after pruning: 1739


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.8 (1,1:814)  779  0.00 0.12 0.25  KSU018_D08_BE500634Ld12P006F04F101F1_058.ab1        3   816 (130)  C KSU019_D08_BE500634Ld12P006F04F101R1_058.ab1   (6)   813     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  398 nodes

 201 str. conn. components

Path
    1  C KSU019_D08_BE500634Ld12P006F04F101R1_058.ab1   819 
   19    KSU018_D08_BE500634Ld12P006F04F101F1_058.ab1    14 
  239  C KSU019_D08_BE500634Ld12P006F04F101R1_058.ab1   581 
  247    KSU018_D08_BE500634Ld12P006F04F101F1_058.ab1   242 
  635  C KSU019_D08_BE500634Ld12P006F04F101R1_058.ab1   185 
  803    KSU018_D08_BE500634Ld12P006F04F101F1_058.ab1   798 
Contig length: old 950, new 951

Contig length: old 951, new 951
New start: 0