No. words: 597; after pruning: 571


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.9 -0.9 (1,1:317)   87  6.25 1.56 0.78  KSU018_E10_BE591142Ld13P006H04H101F1_072.ab1        1   128 (0)  C KSU019_E10_BE591142Ld13P006H04H101R1_072.ab1   (150)   319   191 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.9       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  46 nodes

 25 str. conn. components

Path
    1  C KSU019_E10_BE591142Ld13P006H04H101R1_072.ab1   469 
Contig length: old 469, new 469

Contig length: old 469, new 469
New start: 0