No. words: 1243; after pruning: 1203


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:610)  581  0.16 0.00 0.49  KSU002_A12_BE606392At02P006C05C111F1_085.ab1        1   613 (17)  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   (3)   610     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   613 
    7    KSU002_A12_BE606392At02P006C05C111F1_085.ab1     4 
   11  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   603 
   19    KSU002_A12_BE606392At02P006C05C111F1_085.ab1    16 
   23  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   591 
   27    KSU002_A12_BE606392At02P006C05C111F1_085.ab1    24 
   35  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   579 
   43    KSU002_A12_BE606392At02P006C05C111F1_085.ab1    40 
   55  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   559 
   63    KSU002_A12_BE606392At02P006C05C111F1_085.ab1    60 
   67  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   547 
   87    KSU002_A12_BE606392At02P006C05C111F1_085.ab1    84 
   91  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   523 
   95    KSU002_A12_BE606392At02P006C05C111F1_085.ab1    92 
   99  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   515 
  103    KSU002_A12_BE606392At02P006C05C111F1_085.ab1   100 
  111  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   503 
  119    KSU002_A12_BE606392At02P006C05C111F1_085.ab1   116 
  135  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   479 
  139    KSU002_A12_BE606392At02P006C05C111F1_085.ab1   136 
  151  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   463 
  171    KSU002_A12_BE606392At02P006C05C111F1_085.ab1   168 
  243  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   371 
  263    KSU002_A12_BE606392At02P006C05C111F1_085.ab1   260 
  283  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   331 
  371    KSU002_A12_BE606392At02P006C05C111F1_085.ab1   368 
  375  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   239 
  423    KSU002_A12_BE606392At02P006C05C111F1_085.ab1   420 
  435  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1   179 
  527    KSU002_A12_BE606392At02P006C05C111F1_085.ab1   525 
  531  C KSU003_A12_BE606392At02P006C05C111R1_085.ab1    83 
  567    KSU002_A12_BE606392At02P006C05C111F1_085.ab1   565 
Contig length: old 632, new 632

Contig length: old 632, new 632
New start: 0