No. words: 1263; after pruning: 1223


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 10.0 (1,1:613)  588  0.49 0.00 0.16  KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1        2   614 (27)  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   (10)   612     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   622 
   14    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1     5 
   18  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   605 
   26    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1    17 
   30  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   593 
   34    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1    25 
   42  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   581 
   46    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1    37 
   54  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   569 
   70    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1    61 
   78  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   545 
   82    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1    73 
  102  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   521 
  106    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1    97 
  126  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   497 
  134    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   125 
  150  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   473 
  158    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   149 
  162  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   461 
  182    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   173 
  186  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   437 
  201    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   192 
  205  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   418 
  209    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   200 
  221  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   402 
  241    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   232 
  249  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   374 
  389    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   380 
  393  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   230 
  436    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   427 
  448  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   175 
  488    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   479 
  492  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1   131 
  531    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   522 
  547  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1    76 
  591    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   582 
  595  C KSU007_E03_BE606392Tu02P006C05C111R1_019.ab1    28 
  603    KSU006_E03_BE606392Tu02P006C05C111F1_019.ab1   594 
Contig length: old 649, new 650

Contig length: old 650, new 650
New start: 0