No. words: 1429; after pruning: 1403


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 7.8 (1,1:678)  639  0.00 0.15 0.30  KSU050_A10_BE637255As02P009A04A0101F1_080.ab1        5   676 (42)  C KSU051_A10_BE637255As02P009A04A0101R1_080.ab1   (36)   675     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C KSU051_A10_BE637255As02P009A04A0101R1_080.ab1   711 
   96    KSU050_A10_BE637255As02P009A04A0101F1_080.ab1    63 
  112  C KSU051_A10_BE637255As02P009A04A0101R1_080.ab1   600 
  156    KSU050_A10_BE637255As02P009A04A0101F1_080.ab1   123 
  176  C KSU051_A10_BE637255As02P009A04A0101R1_080.ab1   536 
  272    KSU050_A10_BE637255As02P009A04A0101F1_080.ab1   239 
  340  C KSU051_A10_BE637255As02P009A04A0101R1_080.ab1   372 
  412    KSU050_A10_BE637255As02P009A04A0101F1_080.ab1   379 
  508  C KSU051_A10_BE637255As02P009A04A0101R1_080.ab1   204 
  588    KSU050_A10_BE637255As02P009A04A0101F1_080.ab1   555 
  596  C KSU051_A10_BE637255As02P009A04A0101R1_080.ab1   116 
  616    KSU050_A10_BE637255As02P009A04A0101F1_080.ab1   583 
  648  C KSU051_A10_BE637255As02P009A04A0101R1_080.ab1    64 
  652    KSU050_A10_BE637255As02P009A04A0101F1_080.ab1   619 
  672  C KSU051_A10_BE637255As02P009A04A0101R1_080.ab1    40 
  676    KSU050_A10_BE637255As02P009A04A0101F1_080.ab1   643 
Contig length: old 750, new 751

Contig length: old 751, new 751
New start: 0